Separate implementation of graph and tree creation to speed it up.
Graph implementation maps upfront all locations to sequences of nodes,
tree implementation uses a per-parent map to keep track of a different
node per location per parent.

When reconciling samples, cleanup file paths to allow functions to be
combined if their source filenames match after cleanup (eg "src.cpp" and
"./src.cpp").

Also clean up existing uses of filepath to avoid passing empty strings
to it: filepath.Base("") returns "."

Also update the build instructions to use go get